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Home > Protein Function Prediction for Omics Era > Protein Function Prediction Using Protein–Protein Interaction Networks
Protein Function Prediction for Omics Era |
Daisuke Kihara
Springer Netherlands
Protein Function Prediction for Omics Era
Protein Function Prediction Using Protein–Protein Interaction Networks
Authors

Hon Nian Chua; Guimei Liu; Limsoon Wong

ARI Id

1664532429022_2079231

Access

Not Available Free

Pages

243-270

DOI

10.1007/978-94-007-0881-5_13

Chapter URL

https://rd.springer.com/chapter/10.1007/978-94-007-0881-5_13

Table of Contents of Book
Showing 1 to 17 of 17 entries
Chapters/HeadingsAuthor(s)PagesInfo
Front Matter
i-xiii
Computational Protein Function Prediction: Framework and Challenges
Meghana Chitale; Daisuke Kihara
1-17
Enhanced Sequence-Based Function Prediction Methods and Application to Functional Similarity Networks
Meghana Chitale; Daisuke Kihara
19-34
Gene Cluster Prediction and Its Application to Genome Annotation
Vikas Rao Pejaver; Heewook Lee; Sun Kim
35-54
Functional Inference in Microbial Genomics Based on Large-Scale Comparative Analysis
Ikuo Uchiyama
55-92
Predicting Protein Functional Sites with Phylogenetic Motifs: Past, Present and Beyond
Dennis R. Livesay; Dukka Bahadur KC; David La
93-105
Exploiting Protein Structures to Predict Protein Functions
Alison Cuff; Oliver Redfern; Benoit Dessailly; Christine Orengo
107-123
Sequence Order Independent Comparison of Protein Global Backbone Structures and Local Binding Surfaces for Evolutionary and Functional Inference
Joe Dundas; Bhaskar DasGupta; Jie Liang
125-143
Protein Binding Ligand Prediction Using Moments-Based Methods
Rayan Chikhi; Lee Sael; Daisuke Kihara
145-163
Computational Methods for Predicting DNA-Binding Sites at a Genomic Scale
Shandar Ahmad
165-182
Electrostatic Properties for Protein Functional Site Prediction
Joslynn S. Lee; Mary Jo Ondrechen
183-196
Function Prediction of Genes: From Molecular Function to Cellular Function
Kengo Kinoshita; Takeshi Obayashi
197-214
Predicting Gene Function Using Omics Data: From Data Preparation to Data Integration
Weidong Tian; Xinran Dong; Yuanpeng Zhou; Ren Ren
215-242
Protein Function Prediction Using Protein–Protein Interaction Networks
Hon Nian Chua; Guimei Liu; Limsoon Wong
243-270
KEGG and GenomeNet Resources for Predicting Protein Function from Omics Data Including KEGG PLANT Resource
Toshiaki Tokimatsu; Masaaki Kotera; Susumu Goto; Minoru Kanehisa
271-288
Towards Elucidation of the Escherichia coli K-12 Unknowneome
Yukako Tohsato; Natsuko Yamamoto; Toru Nakayashiki; Rikiya Takeuchi; Barry L. Wanner; Hirotada Mori
289-305
Back Matter
307-310
Chapters/HeadingsAuthor(s)PagesInfo
Showing 1 to 17 of 17 entries
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