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Home > Microbial Metagenomics, Metatranscriptomics, and Metaproteomics > Chapter Nine - Preparation and Metatranscriptomic Analyses of Host–Microbe Systems
Microbial Metagenomics, Metatranscriptomics, and Metaproteomics |
Edward F. DeLong
Academic Press
Microbial Metagenomics, Metatranscriptomics, and Metaproteomics
Chapter Nine - Preparation and Metatranscriptomic Analyses of Host–Microbe Systems
Authors

Jarrad T. Hampton-Marcell; Stephanie M. Moormann; Sarah M. Owens; Jack A. Gilbert

ARI Id

1665525133783_17123495

Access

Not Available Free

Pages

169-185

Table of Contents of Book
Showing 1 to 20 of 35 entries
Chapters/HeadingsAuthor(s)PagesInfo
Series Page
ii
Copyright
iv
Contributors
xiii-xix
Preface
Edward F. DeLong
xxi
Methods in Enzymology
xxiii-lix
Section I: Preparation and Genomic Analyses of Single Cells from Natural Populations
Chapter One - In-Solution Fluorescence < em> In Situ< /em> Hybridization and Fluorescence-Activated Cell Sorting for Single Cell and Population Genome Recovery
Mohamed F. Haroon; Connor T. Skennerton; Jason A. Steen; Nancy Lachner; Philip Hugenholtz; Gene W. Tyson
3-19
Chapter Two - Whole Cell Immunomagnetic Enrichment of Environmental Microbial Consortia Using rRNA-Targeted Magneto-FISH
Elizabeth Trembath-Reichert; Abigail Green-Saxena; Victoria J. Orphan
21-44
Chapter Three - Coupling FACS and Genomic Methods for the Characterization of Uncultivated Symbionts
Anne Thompson; Shellie Bench; Brandon Carter; Jonathan Zehr
45-60
Chapter Four - Optofluidic Cell Selection from Complex Microbial Communities for Single-Genome Analysis
Zachary C. Landry; Stephen J. Giovanonni; Stephen R. Quake; Paul C. Blainey
61-90
Chapter Five - Quantifying and Identifying the Active and Damaged Subsets of Indigenous Microbial Communities
Corinne Ferrier Maurice; Peter James Turnbaugh
91-107
Section II: Microbial Community Genomics—Sampling, Metagenomic Library Preparation, and Analysis
Chapter Six - Preparation of BAC Libraries from Marine Microbial Populations
Gazalah Sabehi; Oded Béjà
111-122
Chapter Seven - Preparation of Fosmid Libraries and Functional Metagenomic Analysis of Microbial Community DNA
Asunción Martínez; Marcia S. Osburne
123-142
Chapter Eight - Preparation of Metagenomic Libraries from Naturally Occurring Marine Viruses
Sergei A. Solonenko; Matthew B. Sullivan
143-165
Section III: Microbial Community Transcriptomics—Sample Preparation, cDNA Library Construction, and Analysis
Chapter Nine - Preparation and Metatranscriptomic Analyses of Host–Microbe Systems
Jarrad T. Hampton-Marcell; Stephanie M. Moormann; Sarah M. Owens; Jack A. Gilbert
169-185
Chapter Ten - Preparation of Microbial Community cDNA for Metatranscriptomic Analysis in Marine Plankton
Frank J. Stewart
187-218
Chapter Eleven - Sequential Isolation of Metabolites, RNA, DNA, and Proteins from the Same Unique Sample
Hugo Roume; Anna Heintz-Buschart; Emilie E.L. Muller; Paul Wilmes
219-236
Chapter Twelve - Use of Internal Standards for Quantitative Metatranscriptome and Metagenome Analysis
Brandon M. Satinsky; Scott M. Gifford; Byron C. Crump; Mary Ann Moran
237-250
Chapters/HeadingsAuthor(s)PagesInfo
Showing 1 to 20 of 35 entries
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